3D structure

PDB id
6OUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound 70S complex at long incubation time
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GG*UGACC
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OUO_120 not in the Motif Atlas
Homologous match to IL_6CZR_125
Geometric discrepancy: 0.1864
The information below is about IL_6CZR_125
Detailed Annotation
C-loop
Broad Annotation
No text annotation
Motif group
IL_99460.1
Basepair signature
cWW-L-cWW-L-L
Number of instances in this motif group
3

Unit IDs

6OUO|1|2|G|292
6OUO|1|2|G|293
*
6OUO|1|2|U|304
6OUO|1|2|G|305
6OUO|1|2|A|306
6OUO|1|2|C|307
6OUO|1|2|C|308

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

Chain u
30S ribosomal protein S16

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0633 s