IL_6OUO_128

3D structure

PDB id

6OUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound 70S complex at long incubation time

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OUO_128 not in the Motif Atlas

Homologous match to IL_4LFB_022

Geometric discrepancy: 0.1437

The information below is about IL_4LFB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_20847.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

6OUO|1|2|C|569
6OUO|1|2|G|570
6OUO|1|2|U|571
6OUO|1|2|A|572
6OUO|1|2|A|573
6OUO|1|2|A|574
6OUO|1|2|G|575
*
6OUO|1|2|C|880
6OUO|1|2|G|881

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain q

30S ribosomal protein S12

Chain v

30S ribosomal protein S17