IL_6P5J_083
3D structure
- PDB id
- 6P5J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CACUCC*GCCCG
- Length
- 11 nucleotides
- Bulged bases
- 6P5J|1|5|C|266
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6P5J|1|5|C|168
6P5J|1|5|A|169
6P5J|1|5|C|170
6P5J|1|5|U|171
6P5J|1|5|C|172
6P5J|1|5|C|173
*
6P5J|1|5|G|263
6P5J|1|5|C|264
6P5J|1|5|C|265
6P5J|1|5|C|266
6P5J|1|5|G|267
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain AL
- eL13
- Chain Ah
- eL35
Coloring options: