IL_6P5K_269
3D structure
- PDB id
- 6P5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUUGACAG*CUUUCUCGAU
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6P5K|1|2|A|1287
6P5K|1|2|U|1288
6P5K|1|2|U|1289
6P5K|1|2|G|1290
6P5K|1|2|A|1291
6P5K|1|2|C|1292
6P5K|1|2|A|1293
6P5K|1|2|G|1294
*
6P5K|1|2|C|1305
6P5K|1|2|U|1306
6P5K|1|2|U|1307
6P5K|1|2|U|1308
6P5K|1|2|C|1309
6P5K|1|2|U|1310
6P5K|1|2|C|1311
6P5K|1|2|G|1312
6P5K|1|2|A|1313
6P5K|1|2|U|1314
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain L
- eS10
- Chain N
- eS12
- Chain Q
- uS19
- Chain e
- eS29
- Chain g
- eS31
Coloring options: