IL_6PC6_023

3D structure

PDB id

6PC6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 47

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UC*GUUA

Length

6 nucleotides

Bulged bases

6PC6|1|I|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6PC6_023 not in the Motif Atlas

Geometric match to IL_5J7L_268

Geometric discrepancy: 0.1086

The information below is about IL_5J7L_268

Detailed Annotation

Stack outside cWW

Broad Annotation

No text annotation

Motif group

IL_56987.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

3

Unit IDs

6PC6|1|I|U|847
6PC6|1|I|C|848
*
6PC6|1|I|G|930
6PC6|1|I|U|931
6PC6|1|I|U|932
6PC6|1|I|A|933

Current chains

Chain I

23S ribosomal RNA

Nearby chains