IL_6PCR_010

3D structure

PDB id

6PCR (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 40o

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6PCR_010 not in the Motif Atlas

Homologous match to IL_5J7L_254

Geometric discrepancy: 0.1063

The information below is about IL_5J7L_254

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.3

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

6PCR|1|I|U|293
6PCR|1|I|A|294
6PCR|1|I|G|295
*
6PCR|1|I|C|343
6PCR|1|I|A|344
6PCR|1|I|A|345
6PCR|1|I|A|346
6PCR|1|I|A|347

Current chains

Chain I

23S ribosomal RNA

Nearby chains