IL_6Q95_040
3D structure
- PDB id
- 6Q95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGAG*CUUUAAAGAGUGCGUAAUAGCUCAC
- Length
- 29 nucleotides
- Bulged bases
- 6Q95|1|1|A|1088, 6Q95|1|1|U|1094, 6Q95|1|1|A|1095, 6Q95|1|1|A|1096
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q95|1|1|G|1055
6Q95|1|1|G|1056
6Q95|1|1|A|1057
6Q95|1|1|G|1058
*
6Q95|1|1|C|1080
6Q95|1|1|U|1081
6Q95|1|1|U|1082
6Q95|1|1|U|1083
6Q95|1|1|A|1084
6Q95|1|1|A|1085
6Q95|1|1|A|1086
6Q95|1|1|G|1087
6Q95|1|1|A|1088
6Q95|1|1|G|1089
6Q95|1|1|U|1090
6Q95|1|1|G|1091
6Q95|1|1|C|1092
6Q95|1|1|G|1093
6Q95|1|1|U|1094
6Q95|1|1|A|1095
6Q95|1|1|A|1096
6Q95|1|1|U|1097
6Q95|1|1|A|1098
6Q95|1|1|G|1099
6Q95|1|1|C|1100
6Q95|1|1|U|1101
6Q95|1|1|C|1102
6Q95|1|1|A|1103
6Q95|1|1|C|1104
Current chains
- Chain 1
- 23S RIBOSOMAL RNA
Nearby chains
- Chain F
- 50S ribosomal protein L6
- Chain H
- 50S RIBOSOMAL PROTEIN L10 AND L11
- Chain I
- 50S RIBOSOMAL PROTEIN L10 AND L11
- Chain f
- 50S ribosomal protein L36
Coloring options: