IL_6Q95_041

3D structure

PDB id

6Q95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGUUG*CAUCC

Length

10 nucleotides

Bulged bases

6Q95|1|1|U|1061, 6Q95|1|1|U|1078

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Q95|1|1|G|1058
6Q95|1|1|G|1059
6Q95|1|1|U|1060
6Q95|1|1|U|1061
6Q95|1|1|G|1062
*
6Q95|1|1|C|1076
6Q95|1|1|A|1077
6Q95|1|1|U|1078
6Q95|1|1|C|1079
6Q95|1|1|C|1080

Current chains

Chain 1

23S RIBOSOMAL RNA

Nearby chains

Chain I

50S RIBOSOMAL PROTEIN L10 AND L11