IL_6Q95_189
3D structure
- PDB id
- 6Q95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CCGCGAAGACAGCCA*UGGUCGAGUGG
- Length
- 26 nucleotides
- Bulged bases
- 6Q95|1|1|C|1043, 6Q95|1|1|A|1045, 6Q95|1|1|A|1046, 6Q95|1|1|U|1113
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q95|1|1|C|1040
6Q95|1|1|C|1041
6Q95|1|1|G|1042
6Q95|1|1|C|1043
6Q95|1|1|G|1044
6Q95|1|1|A|1045
6Q95|1|1|A|1046
6Q95|1|1|G|1047
6Q95|1|1|A|1048
6Q95|1|1|C|1049
6Q95|1|1|A|1050
6Q95|1|1|G|1051
6Q95|1|1|C|1052
6Q95|1|1|C|1053
6Q95|1|1|A|1054
*
6Q95|1|1|U|1105
6Q95|1|1|G|1106
6Q95|1|1|G|1107
6Q95|1|1|U|1108
6Q95|1|1|C|1109
6Q95|1|1|G|1110
6Q95|1|1|A|1111
6Q95|1|1|G|1112
6Q95|1|1|U|1113
6Q95|1|1|G|1114
6Q95|1|1|G|1115
Current chains
- Chain 1
- 23S RIBOSOMAL RNA
Nearby chains
- Chain F
- 50S ribosomal protein L6
- Chain H
- 50S RIBOSOMAL PROTEIN L10 AND L11
- Chain V
- 50S ribosomal protein L25
- Chain f
- 50S ribosomal protein L36
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