IL_6Q97_121

3D structure

PDB id

6Q97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGGAUAAC*GCUAAUACC

Length

17 nucleotides

Bulged bases

6Q97|1|2|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Q97|1|2|G|146
6Q97|1|2|G|147
6Q97|1|2|G|148
6Q97|1|2|A|149
6Q97|1|2|U|150
6Q97|1|2|A|151
6Q97|1|2|A|152
6Q97|1|2|C|153
*
6Q97|1|2|G|168
6Q97|1|2|C|169
6Q97|1|2|U|170
6Q97|1|2|A|171
6Q97|1|2|A|172
6Q97|1|2|U|173
6Q97|1|2|A|174
6Q97|1|2|C|175
6Q97|1|2|C|176

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain y

30S ribosomal protein S20