IL_6Q97_188
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGGGGGUAG*CGAAUACCGG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|1|C|854
6Q97|1|1|G|855
6Q97|1|1|G|856
6Q97|1|1|G|857
6Q97|1|1|G|858
6Q97|1|1|G|859
6Q97|1|1|U|860
6Q97|1|1|A|861
6Q97|1|1|G|862
*
6Q97|1|1|C|915
6Q97|1|1|G|916
6Q97|1|1|A|917
6Q97|1|1|A|918
6Q97|1|1|U|919
6Q97|1|1|A|920
6Q97|1|1|C|921
6Q97|1|1|C|922
6Q97|1|1|G|923
6Q97|1|1|G|924
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
- Chain W
- 50S ribosomal protein L27
- Chain Z
- 50S ribosomal protein L30
Coloring options: