IL_6Q97_189
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AGCACUGUUU*AUGCAAACU
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|1|A|863
6Q97|1|1|G|864
6Q97|1|1|C|865
6Q97|1|1|A|866
6Q97|1|1|C|867
6Q97|1|1|U|868
6Q97|1|1|G|869
6Q97|1|1|U|870
6Q97|1|1|U|871
6Q97|1|1|U|872
*
6Q97|1|1|A|905
6Q97|1|1|U|906
6Q97|1|1|G|907
6Q97|1|1|C|908
6Q97|1|1|A|909
6Q97|1|1|A|910
6Q97|1|1|A|911
6Q97|1|1|C|912
6Q97|1|1|U|913
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
Coloring options: