IL_6Q97_237

3D structure

PDB id

6Q97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUGUUGC*GAACUCAA

Length

15 nucleotides

Bulged bases

6Q97|1|2|U|1126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Q97|1|2|U|1122
6Q97|1|2|U|1123
6Q97|1|2|G|1124
6Q97|1|2|U|1125
6Q97|1|2|U|1126
6Q97|1|2|G|1127
6Q97|1|2|C|1128
*
6Q97|1|2|G|1144
6Q97|1|2|A|1145
6Q97|1|2|A|1146
6Q97|1|2|C|1147
6Q97|1|2|U|1148
6Q97|1|2|C|1149
6Q97|1|2|A|1150
6Q97|1|2|A|1151

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S9

Chain o

30S ribosomal protein S10