IL_6Q97_243
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAUGGUAGUGUG*CAUGCGAGAGUAG
- Length
- 26 nucleotides
- Bulged bases
- 6Q97|1|3|U|103
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|3|C|71
6Q97|1|3|G|72
6Q97|1|3|A|73
6Q97|1|3|U|74
6Q97|1|3|G|75
6Q97|1|3|G|76
6Q97|1|3|U|77
6Q97|1|3|A|78
6Q97|1|3|G|79
6Q97|1|3|U|80
6Q97|1|3|G|81
6Q97|1|3|U|82
6Q97|1|3|G|83
*
6Q97|1|3|C|93
6Q97|1|3|A|94
6Q97|1|3|U|95
6Q97|1|3|G|96
6Q97|1|3|C|97
6Q97|1|3|G|98
6Q97|1|3|A|99
6Q97|1|3|G|100
6Q97|1|3|A|101
6Q97|1|3|G|102
6Q97|1|3|U|103
6Q97|1|3|A|104
6Q97|1|3|G|105
Current chains
- Chain 3
- 5S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain M
- 50S ribosomal protein L16
- Chain V
- 50S ribosomal protein L25
- Chain Z
- 50S ribosomal protein L30
Coloring options: