IL_6Q98_163
3D structure
- PDB id
- 6Q98 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in P site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- UGCGAAACC*GAUGUAGG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q98|1|4|U|28
6Q98|1|4|G|29
6Q98|1|4|C|30
6Q98|1|4|G|31
6Q98|1|4|A|32
6Q98|1|4|A|33
6Q98|1|4|A|34
6Q98|1|4|C|35
6Q98|1|4|C|36
*
6Q98|1|4|G|318
6Q98|1|4|A|319
6Q98|1|4|U|320
6Q98|1|4|G|321
6Q98|1|4|U|322
6Q98|1|4|A|323
6Q98|1|4|G|324
6Q98|1|4|G|325
Current chains
- Chain 4
- transfer-messenger RNA (tmRNA)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain E
- 50S ribosomal protein L5
- Chain a
- 50S ribosomal protein L31
- Chain r
- 30S ribosomal protein S13
- Chain x
- 30S ribosomal protein S19
Coloring options: