IL_6Q98_172

3D structure

PDB id

6Q98 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tmRNA SmpB bound in P site of E. coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GCCUGAAUC*GUGAGC

Length

15 nucleotides

Bulged bases

6Q98|1|1|U|276, 6Q98|1|1|G|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Q98|1|1|G|273
6Q98|1|1|C|274
6Q98|1|1|C|275
6Q98|1|1|U|276
6Q98|1|1|G|277
6Q98|1|1|A|278
6Q98|1|1|A|279
6Q98|1|1|U|280
6Q98|1|1|C|281
*
6Q98|1|1|G|359
6Q98|1|1|U|360
6Q98|1|1|G|361
6Q98|1|1|A|362
6Q98|1|1|G|363
6Q98|1|1|C|364

Current chains

Chain 1

23S ribosomal RNA

Nearby chains