IL_6Q98_221
3D structure
- PDB id
- 6Q98 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in P site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GCACUGUUU*AUGCAAAC
- Length
- 17 nucleotides
- Bulged bases
- 6Q98|1|1|A|910, 6Q98|1|1|A|911
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q98|1|1|G|864
6Q98|1|1|C|865
6Q98|1|1|A|866
6Q98|1|1|C|867
6Q98|1|1|U|868
6Q98|1|1|G|869
6Q98|1|1|U|870
6Q98|1|1|U|871
6Q98|1|1|U|872
*
6Q98|1|1|A|905
6Q98|1|1|U|906
6Q98|1|1|G|907
6Q98|1|1|C|908
6Q98|1|1|A|909
6Q98|1|1|A|910
6Q98|1|1|A|911
6Q98|1|1|C|912
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain 4
- Transfer-messenger RNA; tmRNA
- Chain M
- 50S ribosomal protein L16
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