IL_6Q98_224

3D structure

PDB id

6Q98 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tmRNA SmpB bound in P site of E. coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CUAUGU*ACAAAUG

Length

13 nucleotides

Bulged bases

6Q98|1|1|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Q98|1|1|C|1437
6Q98|1|1|U|1438
6Q98|1|1|A|1439
6Q98|1|1|U|1440
6Q98|1|1|G|1441
6Q98|1|1|U|1442
*
6Q98|1|1|A|1549
6Q98|1|1|C|1550
6Q98|1|1|A|1551
6Q98|1|1|A|1552
6Q98|1|1|A|1553
6Q98|1|1|U|1554
6Q98|1|1|G|1555

Current chains

Chain 1

23S ribosomal RNA

Nearby chains