IL_6Q98_225
3D structure
- PDB id
- 6Q98 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in P site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- AUAUGUAG*UGAAAU
- Length
- 14 nucleotides
- Bulged bases
- 6Q98|1|1|U|1714
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q98|1|1|A|1711
6Q98|1|1|U|1712
6Q98|1|1|A|1713
6Q98|1|1|U|1714
6Q98|1|1|G|1715
6Q98|1|1|U|1716
6Q98|1|1|A|1717
6Q98|1|1|G|1718
*
6Q98|1|1|U|1742
6Q98|1|1|G|1743
6Q98|1|1|A|1744
6Q98|1|1|A|1745
6Q98|1|1|A|1746
6Q98|1|1|U|1747
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: