IL_6QDW_016

3D structure

PDB id

6QDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

GCCUGAAUC*GUGAGC

Length

15 nucleotides

Bulged bases

6QDW|1|b|G|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QDW|1|b|G|273
6QDW|1|b|C|274
6QDW|1|b|C|275
6QDW|1|b|U|276
6QDW|1|b|G|277
6QDW|1|b|A|278
6QDW|1|b|A|279
6QDW|1|b|U|280
6QDW|1|b|C|281
*
6QDW|1|b|G|359
6QDW|1|b|U|360
6QDW|1|b|G|361
6QDW|1|b|A|362
6QDW|1|b|G|363
6QDW|1|b|C|364

Current chains

Chain b

23S rRNA

Nearby chains