RNA 3D Hub //

6QDW Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6QDW_0011/a/38:44No text annotation
geometric
HL_5J7L_203
HL_47787.2
HL_6QDW_0021/a/86:90Mini UNCG
homologous
HL_5J7L_204
HL_48778.2
HL_6QDW_0031/b/59:68No text annotation
homologous
HL_5J7L_134
HL_35677.3
HL_6QDW_0041/b/87:95No text annotation
homologous
HL_5J7L_135
HL_80241.1
HL_6QDW_0051/b/123:128No text annotation
homologous
HL_4WF9_003
HL_75660.5
HL_6QDW_0061/b/137:142UNCG
geometric
HL_6QN3_003
HL_34617.5
HL_6QDW_0071/b/158:168No text annotation
homologous
HL_5J7L_138
HL_68257.1
HL_6QDW_0081/b/194:201No text annotation
homologous
HL_5J7L_139
HL_30068.2
HL_6QDW_0091/b/225:230No text annotation
homologous
HL_5J7L_140
HL_62934.1
HL_6QDW_0101/b/246:252No text annotation
homologous
HL_5J7L_141
HL_37369.2
HL_6QDW_0111/b/305:312T-loop with 1 bulged base
homologous
HL_7A0S_010
HL_01609.3
HL_6QDW_0121/b/319:323No text annotation
homologous
HL_5J7L_143
HL_75660.5
HL_6QDW_0131/b/327:335T-loop with unstacked turn
homologous
HL_5J7L_144
HL_27670.2
HL_6QDW_0141/b/382:392No text annotation
homologous
HL_5J7L_145
HL_91503.7
HL_6QDW_0151/b/410:417Pseudoknot geometry
homologous
HL_5J7L_146
HL_30680.3
HL_6QDW_0161/b/462:467GNRA
homologous
HL_4WF9_015
HL_37824.7
HL_6QDW_0171/b/487:493GNRA
homologous
HL_5J7L_148
HL_37824.7
HL_6QDW_0191/b/568:577T-loop with 2 stacked bulged bases
geometric
HL_5J7L_150
HL_28252.8
HL_6QDW_0201/b/613:619No text annotation
homologous
HL_5J7L_151
HL_80922.2
HL_6QDW_0211/b/631:636GNRA
homologous
HL_5J7L_152
HL_37824.7
HL_6QDW_0221/b/643:649No text annotation
homologous
HL_7RQB_021
NA
HL_6QDW_0231/b/714:721GNRA wlth tandem sheared
homologous
HL_5J7L_154
HL_81538.2
HL_6QDW_0241/b/746:755No text annotation
homologous
HL_4WF9_023
HL_88205.2
HL_6QDW_0251/b/781:787No text annotation
homologous
HL_7A0S_023
HL_53890.2
HL_6QDW_0261/b/828:833No text annotation
homologous
HL_7RQB_025
NA
HL_6QDW_0271/b/881:900No text annotation
HL_6QDW_0281/b/957:964GNRA
homologous
HL_4WF9_027
HL_37824.7
HL_6QDW_0291/b/980:987No text annotation
homologous
HL_5J7L_160
HL_42998.2
HL_6QDW_0301/b/1093:1102No text annotation
geometric
HL_8KAH_003
NA
HL_6QDW_0311/b/1172:1181No text annotation
HL_6QDW_0321/b/1224:1229GNRA
homologous
HL_5J7L_164
HL_37824.7
HL_6QDW_0331/b/1283:1291T-loop with 2 stacked bulged bases
homologous
HL_5J7L_165
HL_28252.8
HL_6QDW_0341/b/1326:1332Pseudoknot geometry with 3' bulge
homologous
HL_5J7L_166
HL_57176.2
HL_6QDW_0351/b/1365:1370GNRA
homologous
HL_5J7L_167
HL_37824.7
HL_6QDW_0361/b/1391:1400No text annotation
homologous
HL_5J7L_168
HL_81545.2
HL_6QDW_0371/b/1452:1463No text annotation
HL_6QDW_0381/b/1494:1500Pseudoknot geometry with 3' bulge
homologous
HL_5J7L_170
HL_57176.2
HL_6QDW_0391/b/1533:1542No text annotation
HL_6QDW_0401/b/1567:1570No text annotation
homologous
HL_7RQB_039
NA
HL_6QDW_0411/b/1614:1621No text annotation
homologous
HL_7RQB_040
NA
HL_6QDW_0421/b/1632:1638GNRA
homologous
HL_5J7L_174
HL_37824.7
HL_6QDW_0431/b/1693:1698UNCG
homologous
HL_5J7L_175
HL_34617.5
HL_6QDW_0441/b/1730:1733No text annotation
homologous
HL_5J7L_176
HL_32346.4
HL_6QDW_0451/b/1754:1758No text annotation
homologous
HL_7RQB_044
NA
HL_6QDW_0461/b/1779:1789No text annotation
homologous
HL_5J7L_178
HL_01962.2
HL_6QDW_0471/b/1808:1813GNRA related
homologous
HL_5J7L_179
HL_04783.2
HL_6QDW_0491/b/1914:1924No text annotation
geometric
HL_5TBW_049
NA
HL_6QDW_0501/b/1953:1961No text annotation
homologous
HL_5J7L_182
HL_20167.2
HL_6QDW_0511/b/2031:2040No text annotation
homologous
HL_4WF9_047
HL_61996.2
HL_6QDW_0741/b/2104:2193No text annotation
HL_6QDW_0521/b/2107:2190No text annotation
HL_6QDW_0531/b/2213:2219No text annotation
homologous
HL_5J7L_185
HL_49922.4
HL_6QDW_0541/b/2252:2260No text annotation
homologous
HL_5J7L_186
HL_85367.2
HL_6QDW_0551/b/2268:2280No text annotation
homologous
HL_5J7L_187
HL_91939.2
HL_6QDW_0561/b/2307:2317No text annotation
homologous
HL_5J7L_188
NA
HL_6QDW_0571/b/2328:2335Pseudoknot geometry
homologous
HL_5J7L_189
HL_93324.4
HL_6QDW_0581/b/2360:2365GNRA
homologous
HL_5J7L_190
HL_37824.7
HL_6QDW_0591/b/2377:2384No text annotation
geometric
HL_8H9D_001
NA
HL_6QDW_0601/b/2408:2417No text annotation
homologous
HL_5J7L_192
HL_53454.2
HL_6QDW_0611/b/2475:2483No text annotation
homologous
HL_7A0S_059
HL_32735.2
HL_6QDW_0621/b/2532:2539No text annotation
homologous
HL_5J7L_194
HL_31585.4
HL_6QDW_0631/b/2555:2561No text annotation
homologous
HL_4WF9_058
HL_30068.2
HL_6QDW_0641/b/2598:2603GNRA
homologous
HL_5J7L_196
HL_37824.7
HL_6QDW_0651/b/2662:2667GNRA
homologous
HL_7RQB_064
NA
HL_6QDW_0661/b/2705:2710Ribsomal LSU H95
homologous
HL_5J7L_198
HL_65794.5
HL_6QDW_0671/b/2749:2763No text annotation
homologous
HL_5J7L_199
HL_74055.2
HL_6QDW_0681/b/2799:2805Other HL
homologous
HL_5J7L_200
HL_08100.1
HL_6QDW_0691/b/2823:2831No text annotation
homologous
HL_5J7L_201
HL_64690.6
HL_6QDW_0701/b/2860:2865GNRA
homologous
HL_5J7L_202
HL_37824.7
HL_6QDW_0711/v/26:42No text annotation
HL_6QDW_0721/v/52:60T-loop with 2 stacked bulged bases
homologous
HL_4WJ4_003
HL_28252.8

Problematic loops

#loop idProblemSequence
HL_6QDW_018No text annotation
HL_6QDW_073No text annotation
HL_6QDW_048No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6QDW_0011/a/6:8,
1/a/112:113		Single stack bend
geometric
IL_5TBW_009
NA
IL_6QDW_0021/a/17:18,
1/a/65:67		Major groove intercalation
homologous
IL_5J7L_355
IL_31462.6
IL_6QDW_0031/a/23:28,
1/a/56:60		No text annotation
homologous
IL_7A0S_103
IL_18472.4
IL_6QDW_0041/a/30:31,
1/a/51:54		Major groove minor groove platform; mini C-loop
homologous
IL_4V9F_103
IL_68140.4
IL_6QDW_0051/a/34:38,
1/a/44:48		Symmetric double minor groove platform
homologous
IL_5J7L_358
IL_58103.11
IL_6QDW_0061/a/71:79,
1/a/97:105		Bacterial 5S Loop E
homologous
IL_5J7L_359
IL_56455.6
IL_6QDW_0081/b/24:30,
1/b/510:516		Triple sheared with non-canonical cWW
homologous
IL_5J7L_245
IL_04021.2
IL_6QDW_0091/b/36:37,
1/b/442:444		Single bulged A
homologous
IL_7RQB_002
NA
IL_6QDW_0101/b/43:44,
1/b/434:436		Minor groove platform
homologous
IL_5J7L_247
IL_51454.3
IL_6QDW_0111/b/81:85,
1/b/97:105		No text annotation
homologous
IL_5J7L_248
IL_37015.1
IL_6QDW_0121/b/183:184,
1/b/212:214		Single stack bend
homologous
IL_5J7L_249
IL_90729.1
IL_6QDW_0131/b/188:194,
1/b/201:208		8x7 Sarcin-Ricin; G-bulge
geometric
IL_5J7L_250
IL_04346.10
IL_6QDW_0141/b/239:245,
1/b/253:258		7x6 Sarcin-Ricin; G-bulge
homologous
IL_5J7L_251
IL_26307.2
IL_6QDW_0151/b/269:271,
1/b/366:370		No text annotation
homologous
IL_5J7L_252
IL_47972.1
IL_6QDW_1151/b/274:281,
1/b/359:363		No text annotation
homologous
IL_5J7L_253
IL_77870.1
IL_6QDW_0171/b/293:295,
1/b/343:347		No text annotation
homologous
IL_4WF9_014
IL_69440.3
IL_6QDW_0181/b/481:484,
1/b/496:509		No text annotation
homologous
IL_5J7L_255
IL_81516.2
IL_6QDW_0191/b/536:539,
1/b/556:559		Double sheared
homologous
IL_5J7L_256
IL_09705.15
IL_6QDW_0201/b/566:568,
1/b/577:579		Isolated non-canonical cWW pair
homologous
IL_5J7L_257
IL_07785.1
IL_6QDW_0211/b/608:612,
1/b/620:624		AAA cross-strand stack
homologous
IL_5J7L_258
IL_66798.2
IL_6QDW_0221/b/674:676,
1/b/808:810		No text annotation
geometric
IL_7RQB_017
NA
IL_6QDW_0231/b/676:680,
1/b/801:808		tHW-tHW cross-strand stack
homologous
IL_7RQB_018
NA
IL_6QDW_0241/b/699:700,
1/b/765:767		Single bulged A
geometric
IL_5J7L_261
IL_31462.6
IL_6QDW_0251/b/704:705,
1/b/730:732		Single bulged G
homologous
IL_5J7L_262
IL_00225.13
IL_6QDW_0261/b/705:709,
1/b/726:730		Triple sheared
geometric
IL_7RQB_021
NA
IL_6QDW_0271/b/740:742,
1/b/759:760		Major groove platform
homologous
IL_5J7L_264
IL_48076.6
IL_6QDW_0281/b/777:779,
1/b/789:793		Multiple bulged bases
homologous
IL_5J7L_265
IL_06549.2
IL_6QDW_0291/b/846:850,
1/b/932:936		No text annotation
IL_6QDW_0301/b/852:853,
1/b/928:930		Single stack bend
homologous
IL_5J7L_269
IL_26793.1
IL_6QDW_0311/b/858:864,
1/b/917:923		7x7 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_5J7L_270
IL_29198.2
IL_6QDW_0321/b/864:865,
1/b/915:917		Single bulged G
homologous
IL_5J7L_271
IL_00225.13
IL_6QDW_0331/b/866:870,
1/b/911:914		C-loop
homologous
IL_5J7L_272
IL_26222.2
IL_6QDW_0341/b/872:874,
1/b/907:909		Isolated non-canonical cWW pair
homologous
IL_5J7L_273
IL_28037.2
IL_6QDW_0351/b/877:881,
1/b/900:904		UAA/GAN
geometric
IL_5TBW_023
NA
IL_6QDW_0361/b/996:998,
1/b/1161:1162		Single bulged C
homologous
IL_5J7L_276
IL_61258.15
IL_6QDW_0371/b/1000:1004,
1/b/1155:1159		UAA/GAN
homologous
IL_4WF9_036
IL_38507.2
IL_6QDW_0381/b/1006:1013,
1/b/1152:1153		SSU/LSU pseudoknot
homologous
IL_5J7L_278
IL_41203.4
IL_6QDW_0391/b/1013:1015,
1/b/1151:1152		Single bulged U
geometric
IL_5J7L_279
IL_89505.4
IL_6QDW_0401/b/1020:1026,
1/b/1142:1146		Kink-turn related
geometric
IL_4WF9_039
IL_57188.5
IL_6QDW_0411/b/1026:1032,
1/b/1126:1142		No text annotation
geometric
IL_5J7L_281
IL_50715.3
IL_6QDW_0421/b/1033:1036,
1/b/1123:1125		Isolated non-canonical cWW pair
homologous
IL_5J7L_282
IL_57744.1
IL_6QDW_1161/b/1054:1092,
1/b/1103:1109		No text annotation
IL_6QDW_0451/b/1198:1200,
1/b/1249:1252		Isolated cWS basepair
homologous
IL_5J7L_286
IL_42997.3
IL_6QDW_0461/b/1204:1208,
1/b/1242:1245		No text annotation
homologous
IL_5J7L_287
IL_91920.1
IL_6QDW_0471/b/1210:1217,
1/b/1236:1240		Kink-turn
homologous
IL_5J7L_288
IL_70923.9
IL_6QDW_0481/b/1264:1271,
1/b/2015:2021		8x7 Sarcin-Ricin; G-bulge
homologous
IL_5J7L_289
IL_04346.10
IL_6QDW_0491/b/1312:1315,
1/b/1605:1606		Major groove platform; stack outside cWW
homologous
IL_7RQB_050
NA
IL_6QDW_0501/b/1321:1325,
1/b/1333:1335		C-loop
homologous
IL_5J7L_291
IL_63596.11
IL_6QDW_0511/b/1353:1357,
1/b/1378:1382		UAA/GAN
homologous
IL_5J7L_292
IL_89021.2
IL_6QDW_0521/b/1359:1363,
1/b/1372:1376		tSH-tHW-tHS
homologous
IL_5J7L_293
IL_17136.7
IL_6QDW_0531/b/1412:1413,
1/b/1592:1594		Single stack bend
geometric
IL_5J7L_032
IL_26793.1
IL_6QDW_1111/b/1413:1418,
1/b/1584:1592		No text annotation
IL_6QDW_0551/b/1419:1423,
1/b/1579:1583		UAA/GAN
geometric
IL_5J7L_295
IL_38507.2
IL_6QDW_0561/b/1434:1437,
1/b/1559:1563		Tandem non-canonical cWW pairs
homologous
IL_5J7L_296
IL_58112.2
IL_6QDW_0571/b/1439:1442,
1/b/1553:1557		tSH-tHW
homologous
IL_5J7L_297
IL_99646.2
IL_6QDW_0581/b/1470:1473,
1/b/1522:1526		No text annotation
homologous
IL_5J7L_299
IL_68574.4
IL_6QDW_0591/b/1476:1480,
1/b/1515:1519		tSH-tHW-tHS
homologous
IL_5J7L_300
IL_38862.4
IL_6QDW_0601/b/1483:1484,
1/b/1509:1512		No text annotation
IL_6QDW_0611/b/1491:1493,
1/b/1501:1502		Single bulged A
homologous
IL_5J7L_302
IL_31462.6
IL_6QDW_0621/b/1528:1531,
1/b/1544:1548		UAA/GAN variation
homologous
IL_5J7L_303
IL_23774.1
IL_6QDW_0631/b/1653:1658,
1/b/2008:2010		No text annotation
homologous
IL_7RQB_064
NA
IL_6QDW_0641/b/1665:1667,
1/b/1999:2001		Isolated tWW turn
homologous
IL_5J7L_305
IL_67095.2
IL_6QDW_0651/b/1668:1671,
1/b/1997:1998		Major groove platform; stack outside cWW
homologous
IL_5J7L_306
IL_50694.7
IL_6QDW_1131/b/1668:1676,
1/b/1994:1998		No text annotation
homologous
IL_5J7L_386
IL_22854.4
IL_6QDW_0661/b/1671:1676,
1/b/1994:1997		Intercalated tWH
geometric
IL_5J7L_307
IL_76758.2
IL_6QDW_0671/b/1688:1693,
1/b/1698:1704		tSH-tSH-tHH-tHS
geometric
IL_5J7L_308
IL_47346.2
IL_6QDW_0681/b/1714:1720,
1/b/1744:1748		6x5 Sarcin-Ricin; G-bulge
homologous
IL_5J7L_309
IL_88269.4
IL_6QDW_0691/b/1722:1726,
1/b/1738:1742		Triple sheared
homologous
IL_5J7L_310
IL_50730.2
IL_6QDW_0701/b/1729:1730,
1/b/1733:1735		Single bulged C
geometric
IL_5J7L_311
IL_61258.15
IL_6QDW_0711/b/1772:1773,
1/b/1984:1986		Single bulged A
homologous
IL_5J7L_312
IL_31462.6
IL_6QDW_0721/b/1800:1806,
1/b/1815:1823		Kink-turn related
homologous
IL_5J7L_313
IL_17069.5
IL_6QDW_0731/b/1839:1842,
1/b/1906:1907		Minor groove platform, major groove intercalation
homologous
IL_5J7L_314
IL_95583.2
IL_6QDW_0741/b/1843:1844,
1/b/1902:1905		Major groove intercalation
homologous
IL_5J7L_315
IL_82107.4
IL_6QDW_0751/b/1848:1851,
1/b/1897:1898		Minor groove platform
homologous
IL_7RQB_073
NA
IL_6QDW_1141/b/1853:1862,
1/b/1886:1895		No text annotation
homologous
IL_5J7L_387
IL_61249.1
IL_6QDW_0761/b/1866:1869,
1/b/1878:1882		UAA/GAN variation
homologous
IL_5J7L_317
IL_77691.5
IL_6QDW_0771/b/1937:1938,
1/b/1968:1971		Bulged stacked bases
geometric
IL_7RQB_076
NA
IL_6QDW_0781/b/1938:1949,
1/b/1965:1968		No text annotation
homologous
IL_7A0S_072
IL_04332.3
IL_6QDW_0791/b/2054:2056,
1/b/2621:2622		Major groove platform
homologous
IL_5J7L_320
IL_48076.6
IL_6QDW_0801/b/2058:2060,
1/b/2616:2619		No text annotation
homologous
IL_5J7L_321
IL_83389.2
IL_6QDW_0811/b/2071:2073,
1/b/2446:2447		Single bulged U
homologous
IL_7A0S_075
IL_89505.4
IL_6QDW_0821/b/2074:2075,
1/b/2442:2445		Minor groove platform
homologous
IL_5J7L_324
IL_51454.3
IL_6QDW_0831/b/2085:2087,
1/b/2240:2243		Isolated tHS basepair with bulges
homologous
IL_5J7L_325
IL_85599.2
IL_6QDW_0841/b/2089:2091,
1/b/2236:2238		Isolated non-canonical cWW pair
homologous
IL_5J7L_326
IL_28037.2
IL_6QDW_0851/b/2206:2208,
1/b/2224:2225		Single bulged U
homologous
IL_5J7L_331
IL_89505.4
IL_6QDW_0861/b/2301:2303,
1/b/2321:2325		No text annotation
geometric
IL_5J7L_332
IL_61476.2
IL_6QDW_0871/b/2354:2357,
1/b/2368:2371		Double sheared
homologous
IL_5J7L_333
IL_09705.15
IL_6QDW_0881/b/2405:2407,
1/b/2418:2419		No text annotation
IL_6QDW_0891/b/2457:2458,
1/b/2502:2504		Single stack bend
homologous
IL_4WF9_089
IL_26793.1
IL_6QDW_0901/b/2458:2459,
1/b/2500:2502		Major groove platform
geometric
IL_7RQB_092
NA
IL_6QDW_0911/b/2461:2463,
1/b/2497:2498		Major groove platform
homologous
IL_4WF9_091
IL_48076.6
IL_6QDW_0921/b/2463:2465,
1/b/2493:2497		Major groove minor groove platform with extra cWW
geometric
IL_5J7L_337
IL_51387.2
IL_6QDW_0931/b/2470:2474,
1/b/2484:2488		Triple sheared
homologous
IL_5J7L_338
IL_17948.2
IL_6QDW_0941/b/2511:2512,
1/b/2584:2586		Major groove platform
homologous
IL_7A0S_088
IL_07039.3
IL_6QDW_0951/b/2514:2516,
1/b/2578:2582		Isolated non-canonical cWW with bulges
homologous
IL_5J7L_340
IL_07785.1
IL_6QDW_0961/b/2516:2517,
1/b/2575:2578		No text annotation
geometric
IL_5J7L_341
IL_42626.2
IL_6QDW_0971/b/2526:2527,
1/b/2544:2547		Major groove platform with intercalation
homologous
IL_5J7L_342
IL_02555.1
IL_6QDW_0981/b/2595:2596,
1/b/2605:2607		Single bulged A
homologous
IL_7RQB_101
NA
IL_6QDW_0991/b/2640:2644,
1/b/2778:2786		tSH-tHS-tHW
homologous
IL_5J7L_345
IL_04638.3
IL_6QDW_1001/b/2656:2662,
1/b/2667:2672		Sarcin-Ricin target in LSU H95; G-bulge
geometric
IL_5J7L_346
IL_16458.4
IL_6QDW_1011/b/2684:2688,
1/b/2729:2731		C-loop
homologous
IL_5J7L_347
IL_63596.11
IL_6QDW_1021/b/2691:2695,
1/b/2722:2726		No text annotation
homologous
IL_5J7L_348
IL_23774.1
IL_6QDW_1031/b/2699:2700,
1/b/2715:2718		Multiple bulged bases
homologous
IL_5J7L_349
IL_42626.2
IL_6QDW_1041/b/2741:2746,
1/b/2766:2771		UAA/GAN with extra cWW
homologous
IL_5J7L_350
IL_49767.8
IL_6QDW_1051/b/2810:2815,
1/b/2893:2896		No text annotation
geometric
IL_5J7L_351
IL_29471.1
IL_6QDW_1061/b/2842:2843,
1/b/2882:2884		Major groove intercalation
homologous
IL_5J7L_352
IL_66635.5
IL_6QDW_1071/b/2847:2850,
1/b/2874:2878		Multiple bulged bases with non-canonical cWW
homologous
IL_5J7L_353
IL_64231.5
IL_6QDW_1081/b/2851:2856,
1/b/2869:2873		tHS double platform
homologous
IL_5J7L_354
IL_70411.2

Problematic loops

#loop idProblemSequence
IL_6QDW_109No text annotation
IL_6QDW_007No text annotation
IL_6QDW_110No text annotation
IL_6QDW_016No text annotation
IL_6QDW_043No text annotation
IL_6QDW_044No text annotation
IL_6QDW_054No text annotation
IL_6QDW_112No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6QDW_0011/a/10:16,
1/a/68:70,
1/a/106:110		No text annotation
homologous
J3_7A0S_014
NA
J3_6QDW_0021/b/30:31,
1/b/474:481,
1/b/509:510		No text annotation
homologous
J3_5J7L_036
J3_60031.2
J3_6QDW_0131/b/30:31,
1/b/474:484,
1/b/496:510		No text annotation
homologous
J3_9DFE_002
J3_92134.2
J3_6QDW_0141/b/32:35,
1/b/445:461,
1/b/468:473		No text annotation
homologous
J3_5J7L_067
J3_30040.2
J3_6QDW_0031/b/56:57,
1/b/70:76,
1/b/110:114		No text annotation
homologous
J3_5J7L_037
J3_35667.2
J3_6QDW_0151/b/297:301,
1/b/316:325,
1/b/337:341		No text annotation
homologous
J3_5J7L_068
J3_46299.2
J3_6QDW_0041/b/685:691,
1/b/775:777,
1/b/793:796		No text annotation
homologous
J3_5J7L_038
J3_64189.2
J3_6QDW_0051/b/700:702,
1/b/734:738,
1/b/762:765		No text annotation
homologous
J3_7RQB_005
NA
J3_6QDW_0061/b/1300:1305,
1/b/1627:1629,
1/b/1641:1644		No text annotation
homologous
J3_5J7L_041
J3_32852.6
J3_6QDW_0071/b/1308:1311,
1/b/1607:1613,
1/b/1622:1624		No text annotation
homologous
J3_9DFE_011
J3_71677.1
J3_6QDW_0161/b/1346:1352,
1/b/1383:1387,
1/b/1404:1405		No text annotation
homologous
J3_9DFE_012
J3_31965.2
J3_6QDW_0171/b/1426:1431,
1/b/1566:1567,
1/b/1570:1576		No text annotation
homologous
J3_5J7L_069
J3_34864.2
J3_6QDW_0081/b/2095:2097,
1/b/2200:2204,
1/b/2227:2232		Kink-turn in J3
homologous
J3_5J7L_044
J3_89368.5
J3_6QDW_0181/b/2286:2288,
1/b/2388:2399,
1/b/2425:2431		No text annotation
homologous
J3_5J7L_070
J3_20992.1
J3_6QDW_0091/b/2299:2301,
1/b/2325:2327,
1/b/2336:2341		No text annotation
homologous
J3_5J7L_045
J3_61124.2
J3_6QDW_0191/b/2299:2303,
1/b/2321:2327,
1/b/2336:2341		No text annotation
homologous
J3_5J7L_071
J3_44961.1
J3_6QDW_0101/b/2521:2524,
1/b/2549:2551,
1/b/2565:2571		No text annotation
homologous
J3_5J7L_046
J3_32601.5
J3_6QDW_0111/b/2793:2795,
1/b/2809:2810,
1/b/2896:2898		No text annotation
homologous
J3_5J7L_047
J3_30104.1
J3_6QDW_0121/b/2816:2819,
1/b/2835:2840,
1/b/2886:2892		No text annotation
homologous
J3_5J7L_048
J3_64069.1
J4_6QDW_0011/b/268:269,
1/b/370:375,
1/b/399:406,
1/b/421:424		No text annotation
homologous
J4_5J7L_018
J4_45801.6
J4_6QDW_0021/b/297:301,
1/b/316:319,
1/b/323:325,
1/b/337:341		No text annotation
homologous
J4_5J7L_019
J4_71729.5
J4_6QDW_0031/b/603:606,
1/b/626:630,
1/b/637:640,
1/b/652:658		No text annotation
homologous
J4_5J7L_020
J4_60168.1
J4_6QDW_0041/b/1272:1278,
1/b/1296:1297,
1/b/1647:1650,
1/b/2013:2014		No text annotation
homologous
J4_5J7L_021
J4_64571.5
J4_6QDW_0051/b/1312:1316,
1/b/1340:1345,
1/b/1406:1407,
1/b/1599:1606		No text annotation
homologous
J4_5J7L_022
J4_69051.6
J4_6QDW_0061/b/1315:1316,
1/b/1340:1345,
1/b/1406:1407,
1/b/1599:1605		No text annotation
homologous
J4_5J7L_023
J4_10313.5
J4_6QDW_0071/b/1446:1447,
1/b/1468:1469,
1/b/1527:1528,
1/b/1548:1549		No text annotation
homologous
J4_5J7L_024
J4_24280.2
J4_6QDW_0081/b/1774:1778,
1/b/1790:1794,
1/b/1829:1832,
1/b/1979:1983		No text annotation
homologous
J4_5J7L_025
J4_61477.5
J4_6QDW_0091/b/1835:1837,
1/b/1909:1910,
1/b/1928:1937,
1/b/1971:1976		No text annotation
homologous
J4_9DFE_008
J4_93343.1
J4_6QDW_0101/b/2289:2293,
1/b/2347:2351,
1/b/2374:2376,
1/b/2385:2387		No text annotation
homologous
J4_5J7L_027
J4_04930.6
J4_6QDW_0111/b/2647:2650,
1/b/2678:2680,
1/b/2735:2739,
1/b/2773:2775		No text annotation
homologous
J4_9DFE_010
J4_77044.4
J5_6QDW_0011/b/47:54,
1/b/116:121,
1/b/130:131,
1/b/148:150,
1/b/176:178		No text annotation
homologous
J5_5J7L_013
J5_01737.2
J5_6QDW_0021/b/531:533,
1/b/562:566,
1/b/579:581,
1/b/1263:1264,
1/b/2021:2022		No text annotation
homologous
J5_5J7L_014
J5_43153.5
J5_6QDW_0031/b/586:591,
1/b/670:673,
1/b/811:814,
1/b/1197:1198,
1/b/1252:1258		No text annotation
homologous
J5_5J7L_015
J5_74302.5
J5_6QDW_0041/b/1676:1684,
1/b/1708:1709,
1/b/1753:1754,
1/b/1758:1766,
1/b/1992:1994		No text annotation
homologous
J5_5J7L_016
J5_62523.6
J5_6QDW_0051/b/2061:2068,
1/b/2450:2457,
1/b/2504:2510,
1/b/2587:2592,
1/b/2610:2615		No text annotation
J5_6QDW_0061/b/2078:2081,
1/b/2247:2250,
1/b/2262:2263,
1/b/2285:2286,
1/b/2431:2439		No text annotation
homologous
J5_4WF9_007
J5_39529.1
J6_6QDW_0011/b/45:46,
1/b/179:183,
1/b/214:224,
1/b/231:235,
1/b/262:266,
1/b/426:433		No text annotation
J6_6QDW_0021/b/2078:2081,
1/b/2247:2250,
1/b/2262:2263,
1/b/2285:2288,
1/b/2388:2399,
1/b/2425:2439		No text annotation
J7_6QDW_0011/b/8:15,
1/b/525:531,
1/b/2022:2027,
1/b/2044:2047,
1/b/2629:2634,
1/b/2792:2793,
1/b/2898:2899		No text annotation
J7_6QDW_0021/b/819:824,
1/b/837:840,
1/b/942:948,
1/b/973:978,
1/b/989:993,
1/b/1165:1166,
1/b/1187:1192		No text annotation

Problematic loops

No problematic loops


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