3D structure

PDB id
6QDW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
UGG*UCAAG
Length
8 nucleotides
Bulged bases
6QDW|1|b|A|1511
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6QDW|1|b|U|1483
6QDW|1|b|G|1484
6QDW|1|b|G|1485
*
6QDW|1|b|U|1508
6QDW|1|b|C|1509
6QDW|1|b|A|1510
6QDW|1|b|A|1511
6QDW|1|b|G|1512

Current chains

Chain b
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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