IL_6QIK_062
3D structure
- PDB id
- 6QIK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCUUC*GGAAUA
- Length
- 11 nucleotides
- Bulged bases
- 6QIK|1|A|U|1629
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QIK_062 not in the Motif Atlas
- Homologous match to IL_5TBW_066
- Geometric discrepancy: 0.3209
- The information below is about IL_5TBW_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48431.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6QIK|1|A|U|1627
6QIK|1|A|C|1628
6QIK|1|A|U|1629
6QIK|1|A|U|1630
6QIK|1|A|C|1631
*
6QIK|1|A|G|1811
6QIK|1|A|G|1812
6QIK|1|A|A|1813
6QIK|1|A|A|1814
6QIK|1|A|U|1815
6QIK|1|A|A|1816
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain Y
- 60S ribosomal protein L27-A
Coloring options: