IL_6QNQ_156
3D structure
- PDB id
- 6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome initiation complex (IC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GAUAAC*GGAAGC
- Length
- 12 nucleotides
- Bulged bases
- 6QNQ|1|14|A|2765
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QNQ_156 not in the Motif Atlas
- Homologous match to IL_7A0S_098
- Geometric discrepancy: 0.1133
- The information below is about IL_7A0S_098
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_91079.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
6QNQ|1|14|G|2737
6QNQ|1|14|A|2738
6QNQ|1|14|U|2739
6QNQ|1|14|A|2740
6QNQ|1|14|A|2741
6QNQ|1|14|C|2742
*
6QNQ|1|14|G|2762
6QNQ|1|14|G|2763
6QNQ|1|14|A|2764
6QNQ|1|14|A|2765
6QNQ|1|14|G|2766
6QNQ|1|14|C|2767
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 15
- 50S ribosomal protein L13
- Chain 59
- 50S ribosomal protein L6
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