IL_6QNQ_360
3D structure
- PDB id
- 6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome initiation complex (IC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GUCC*GGC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QNQ_360 not in the Motif Atlas
- Geometric match to IL_8C3A_096
- Geometric discrepancy: 0.3135
- The information below is about IL_8C3A_096
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_63450.5
- Basepair signature
- cWW-cHS-cWW-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
6QNQ|1|14|G|2400
6QNQ|1|14|U|2401
6QNQ|1|14|C|2402
6QNQ|1|14|C|2403
*
6QNQ|1|14|G|2414
6QNQ|1|14|G|2415
6QNQ|1|14|C|2416
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 35
- 50S ribosomal protein L15
- Chain F5
- 50S ribosomal protein L28
- Chain K5
- 50S ribosomal protein L33
- Chain M5
- 50S ribosomal protein L35
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