IL_6QNR_014

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UUC*GA

Length

5 nucleotides

Bulged bases

6QNR|1|13|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6QNR_014 not in the Motif Atlas

Homologous match to IL_4LFB_014

Geometric discrepancy: 0.1089

The information below is about IL_4LFB_014

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

6QNR|1|13|U|367
6QNR|1|13|U|368
6QNR|1|13|C|369
*
6QNR|1|13|G|392
6QNR|1|13|A|393

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 69

50S ribosomal protein L9

Chain 7I

30S ribosomal protein S16