IL_6QNR_164

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAUAAC*GGAAGC

Length

12 nucleotides

Bulged bases

6QNR|1|14|A|2765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6QNR_164 not in the Motif Atlas

Homologous match to IL_7RQB_107

Geometric discrepancy: 0.1015

The information below is about IL_7RQB_107

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.5

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

5

Unit IDs

6QNR|1|14|G|2737
6QNR|1|14|A|2738
6QNR|1|14|U|2739
6QNR|1|14|A|2740
6QNR|1|14|A|2741
6QNR|1|14|C|2742
*
6QNR|1|14|G|2762
6QNR|1|14|G|2763
6QNR|1|14|A|2764
6QNR|1|14|A|2765
6QNR|1|14|G|2766
6QNR|1|14|C|2767

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 15

50S ribosomal protein L13

Chain 59

50S ribosomal protein L6