IL_6QNR_175

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GU*GAC

Length

5 nucleotides

Bulged bases

6QNR|1|1G|A|397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6QNR_175 not in the Motif Atlas

Homologous match to IL_4LFB_002

Geometric discrepancy: 0.0972

The information below is about IL_4LFB_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

6QNR|1|1G|G|44
6QNR|1|1G|U|45
*
6QNR|1|1G|G|396
6QNR|1|1G|A|397
6QNR|1|1G|C|398

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 7A

30S ribosomal protein S16