IL_6QNR_270

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAUG*CGC

Length

7 nucleotides

Bulged bases

6QNR|1|1H|U|1080

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6QNR_270 not in the Motif Atlas

Homologous match to IL_7RQB_041

Geometric discrepancy: 0.0811

The information below is about IL_7RQB_041

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_43275.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

30

Unit IDs

6QNR|1|1H|G|1078
6QNR|1|1H|A|1079
6QNR|1|1H|U|1080
6QNR|1|1H|G|1081
*
6QNR|1|1H|C|1168
6QNR|1|1H|G|1169
6QNR|1|1H|C|1170

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 51

50S ribosomal protein L6

Chain 88

50S ribosomal protein L16