IL_6QNR_278
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AUGAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QNR_278 not in the Motif Atlas
- Homologous match to IL_7RQB_049
- Geometric discrepancy: 0.0514
- The information below is about IL_7RQB_049
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.7
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
6QNR|1|1H|A|1309
6QNR|1|1H|U|1310
6QNR|1|1H|G|1311
6QNR|1|1H|A|1312
6QNR|1|1H|G|1313
6QNR|1|1H|U|1314
6QNR|1|1H|A|1315
6QNR|1|1H|A|1316
*
6QNR|1|1H|U|2034
6QNR|1|1H|G|2035
6QNR|1|1H|A|2036
6QNR|1|1H|A|2037
6QNR|1|1H|A|2038
6QNR|1|1H|U|2039
6QNR|1|1H|U|2040
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 31
- 50S ribosomal protein L4
- Chain 98
- 50S ribosomal protein L17
- Chain E8
- 50S ribosomal protein L22
- Chain N8
- 50S ribosomal protein L32
Coloring options: