IL_6QNR_308
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- ACGA*UCUAU
- Length
- 9 nucleotides
- Bulged bases
- 6QNR|1|1H|C|2078, 6QNR|1|1H|C|2625, 6QNR|1|1H|U|2626
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QNR_308 not in the Motif Atlas
- Homologous match to IL_9DFE_079
- Geometric discrepancy: 0.0665
- The information below is about IL_9DFE_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70335.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6QNR|1|1H|A|2077
6QNR|1|1H|C|2078
6QNR|1|1H|G|2079
6QNR|1|1H|A|2080
*
6QNR|1|1H|U|2624
6QNR|1|1H|C|2625
6QNR|1|1H|U|2626
6QNR|1|1H|A|2627
6QNR|1|1H|U|2628
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 21
- 50S ribosomal protein L3
- Chain 31
- 50S ribosomal protein L4
- Chain E8
- 50S ribosomal protein L22
- Chain N8
- 50S ribosomal protein L32
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