IL_6QNR_341
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUCCC*GAACAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QNR_341 not in the Motif Atlas
- Geometric match to IL_7A0S_105
- Geometric discrepancy: 0.3677
- The information below is about IL_7A0S_105
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93630.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
6QNR|1|1J|G|33
6QNR|1|1J|U|34
6QNR|1|1J|U|35
6QNR|1|1J|C|36
6QNR|1|1J|C|37
6QNR|1|1J|C|38
*
6QNR|1|1J|G|44
6QNR|1|1J|A|45
6QNR|1|1J|A|46
6QNR|1|1J|C|47
6QNR|1|1J|A|48
6QNR|1|1J|C|49
Current chains
- Chain 1J
- 5S ribosomal RNA
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 49
- 50S ribosomal protein L5
- Chain 65
- 50S ribosomal protein L18
- Chain I5
- 50S ribosomal protein L31
Coloring options: