IL_6QNR_359

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

6QNR|1|14|U|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6QNR_359 not in the Motif Atlas

Homologous match to IL_9DFE_054

Geometric discrepancy: 0.1671

The information below is about IL_9DFE_054

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_08938.1

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

22

Unit IDs

6QNR|1|14|C|1417
6QNR|1|14|G|1418
6QNR|1|14|A|1419
6QNR|1|14|U|1420
6QNR|1|14|G|1421
*
6QNR|1|14|C|1577
6QNR|1|14|U|1578
6QNR|1|14|A|1579
6QNR|1|14|A|1580
6QNR|1|14|G|1581

Current chains

Chain 14

23S ribosomal RNA

Nearby chains