IL_6QNR_385

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAGCCUGUGAACCCC*GGGGGGAGGCGCCGGUGAAAUAC

Length

39 nucleotides

Bulged bases

6QNR|1|1H|A|2149, 6QNR|1|1H|U|2155, 6QNR|1|1H|G|2188, 6QNR|1|1H|G|2189, 6QNR|1|1H|U|2190

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QNR|1|1H|G|2147
6QNR|1|1H|G|2148
6QNR|1|1H|A|2149
6QNR|1|1H|G|2150
6QNR|1|1H|C|2151
6QNR|1|1H|C|2152
6QNR|1|1H|U|2153
6QNR|1|1H|G|2154
6QNR|1|1H|U|2155
6QNR|1|1H|G|2156
6QNR|1|1H|A|2157
6QNR|1|1H|A|2158
6QNR|1|1H|C|2159
6QNR|1|1H|C|2160
6QNR|1|1H|C|2161
6QNR|1|1H|C|2162
*
6QNR|1|1H|G|2175
6QNR|1|1H|G|2176
6QNR|1|1H|G|2177
6QNR|1|1H|G|2178
6QNR|1|1H|G|2179
6QNR|1|1H|G|2180
6QNR|1|1H|A|2181
6QNR|1|1H|G|2182
6QNR|1|1H|G|2183
6QNR|1|1H|C|2184
6QNR|1|1H|G|2185
6QNR|1|1H|C|2186
6QNR|1|1H|C|2187
6QNR|1|1H|G|2188
6QNR|1|1H|G|2189
6QNR|1|1H|U|2190
6QNR|1|1H|G|2191
6QNR|1|1H|A|2192
6QNR|1|1H|A|2193
6QNR|1|1H|A|2194
6QNR|1|1H|U|2195
6QNR|1|1H|A|2196
6QNR|1|1H|C|2197

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 3K

Transfer RNA; tRNA

Chain 71

50S ribosomal protein L1