IL_6QT0_018

3D structure

PDB id

6QT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAAUGUAGC*GUAUUAUAGC

Length

19 nucleotides

Bulged bases

6QT0|1|A|U|534, 6QT0|1|A|U|558

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QT0|1|A|G|531
6QT0|1|A|A|532
6QT0|1|A|A|533
6QT0|1|A|U|534
6QT0|1|A|G|535
6QT0|1|A|U|536
6QT0|1|A|A|537
6QT0|1|A|G|538
6QT0|1|A|C|539
*
6QT0|1|A|G|552
6QT0|1|A|U|553
6QT0|1|A|A|554
6QT0|1|A|U|555
6QT0|1|A|U|556
6QT0|1|A|A|557
6QT0|1|A|U|558
6QT0|1|A|A|559
6QT0|1|A|G|560
6QT0|1|A|C|561

Current chains

Chain A

25S rRNA

Nearby chains

Chain M

60S ribosomal protein L14-A

Chain S

60S ribosomal protein L20-A