IL_6QT0_041

3D structure

PDB id

6QT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUUCCGG*UUGACC

Length

14 nucleotides

Bulged bases

6QT0|1|A|C|1016, 6QT0|1|A|C|1017

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QT0|1|A|G|1012
6QT0|1|A|G|1013
6QT0|1|A|U|1014
6QT0|1|A|U|1015
6QT0|1|A|C|1016
6QT0|1|A|C|1017
6QT0|1|A|G|1018
6QT0|1|A|G|1019
*
6QT0|1|A|U|1033
6QT0|1|A|U|1034
6QT0|1|A|G|1035
6QT0|1|A|A|1036
6QT0|1|A|C|1037
6QT0|1|A|C|1038

Current chains

Chain A

25S rRNA

Nearby chains

Chain E

60S ribosomal protein L11-A

Chain q

60S ribosomal protein L10