IL_6QT0_090

3D structure

PDB id

6QT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

ACAUAGAGG*CUUUAUAGU

Length

18 nucleotides

Bulged bases

6QT0|1|A|A|2502

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QT0|1|A|A|2443
6QT0|1|A|C|2444
6QT0|1|A|A|2445
6QT0|1|A|U|2446
6QT0|1|A|A|2447
6QT0|1|A|G|2448
6QT0|1|A|A|2449
6QT0|1|A|G|2450
6QT0|1|A|G|2451
*
6QT0|1|A|C|2496
6QT0|1|A|U|2497
6QT0|1|A|U|2498
6QT0|1|A|U|2499
6QT0|1|A|A|2500
6QT0|1|A|U|2501
6QT0|1|A|A|2502
6QT0|1|A|G|2503
6QT0|1|A|U|2504

Current chains

Chain A

25S rRNA

Nearby chains

Chain H

60S ribosomal protein L8-A

Chain O

60S ribosomal protein L15-A

Chain h

60S ribosomal protein L36-A