IL_6QT0_138

3D structure

PDB id

6QT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUUGGGGCC*GGUUCUUUGUAAAG

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QT0|1|A|C|166
6QT0|1|A|U|167
6QT0|1|A|U|168
6QT0|1|A|U|169
6QT0|1|A|G|170
6QT0|1|A|G|171
6QT0|1|A|G|172
6QT0|1|A|G|173
6QT0|1|A|C|174
6QT0|1|A|C|175
*
6QT0|1|A|G|243
6QT0|1|A|G|244
6QT0|1|A|U|245
6QT0|1|A|U|246
6QT0|1|A|C|247
6QT0|1|A|U|248
6QT0|1|A|U|249
6QT0|1|A|U|250
6QT0|1|A|G|251
6QT0|1|A|U|252
6QT0|1|A|A|253
6QT0|1|A|A|254
6QT0|1|A|A|255
6QT0|1|A|G|256

Current chains

Chain A

25S rRNA

Nearby chains

Chain K

60S ribosomal protein L13-A

Chain Z

60S ribosomal protein L35-A