IL_6QTZ_003
3D structure
- PDB id
- 6QTZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CC*GAG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QTZ_003 not in the Motif Atlas
- Homologous match to IL_8C3A_004
- Geometric discrepancy: 0.1068
- The information below is about IL_8C3A_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05035.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 38
Unit IDs
6QTZ|1|A|C|27
6QTZ|1|A|C|28
*
6QTZ|1|A|G|56
6QTZ|1|A|A|57
6QTZ|1|A|G|58
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain K
- 60S ribosomal protein L13-A
- Chain O
- 60S ribosomal protein L15-A
- Chain Z
- 60S ribosomal protein L35-A
- Chain i
- 60S ribosomal protein L37-A
- Chain y
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: