IL_6QTZ_026
3D structure
- PDB id
- 6QTZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGAUG*CGGAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QTZ_026 not in the Motif Atlas
- Homologous match to IL_8C3A_028
- Geometric discrepancy: 0.1433
- The information below is about IL_8C3A_028
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82488.1
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
6QTZ|1|A|C|758
6QTZ|1|A|U|759
6QTZ|1|A|G|760
6QTZ|1|A|A|761
6QTZ|1|A|U|762
6QTZ|1|A|G|763
*
6QTZ|1|A|C|768
6QTZ|1|A|G|769
6QTZ|1|A|G|770
6QTZ|1|A|A|771
6QTZ|1|A|U|772
6QTZ|1|A|G|773
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain K
- 60S ribosomal protein L13-A
- Chain N
- 60S ribosomal protein L28
- Chain l
- 60S ribosomal protein L42-A
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