IL_6QTZ_042

3D structure

PDB id

6QTZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUCCGG*UUGA

Length

10 nucleotides

Bulged bases

6QTZ|1|A|C|1016, 6QTZ|1|A|C|1017

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QTZ|1|A|U|1014
6QTZ|1|A|U|1015
6QTZ|1|A|C|1016
6QTZ|1|A|C|1017
6QTZ|1|A|G|1018
6QTZ|1|A|G|1019
*
6QTZ|1|A|U|1033
6QTZ|1|A|U|1034
6QTZ|1|A|G|1035
6QTZ|1|A|A|1036

Current chains

Chain A

25S rRNA

Nearby chains

Chain E

60S ribosomal protein L11-A

Chain q

60S ribosomal protein L10