IL_6R5Q_023

3D structure

PDB id

6R5Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex (post-state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

6R5Q|1|5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R5Q|1|5|A|466
6R5Q|1|5|U|467
6R5Q|1|5|U|468
6R5Q|1|5|C|469
6R5Q|1|5|A|470
6R5Q|1|5|A|471
6R5Q|1|5|C|472
*
6R5Q|1|5|G|682
6R5Q|1|5|C|683
6R5Q|1|5|G|684
6R5Q|1|5|C|685
6R5Q|1|5|A|686
6R5Q|1|5|U|687
6R5Q|1|5|U|688
6R5Q|1|5|U|689

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain r

eL28