IL_8GLP_026

3D structure

PDB id

8GLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8GLP|1|L5|U|467, 8GLP|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GLP|1|L5|A|466
8GLP|1|L5|U|467
8GLP|1|L5|U|468
8GLP|1|L5|C|469
8GLP|1|L5|A|470
8GLP|1|L5|A|471
8GLP|1|L5|C|472
*
8GLP|1|L5|G|682
8GLP|1|L5|C|683
8GLP|1|L5|G|684
8GLP|1|L5|C|685
8GLP|1|L5|A|686
8GLP|1|L5|U|687
8GLP|1|L5|U|688
8GLP|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Lr

60S ribosomal protein L28