IL_6R5Q_094
3D structure
- PDB id
- 6R5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (post-state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGAUC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R5Q_094 not in the Motif Atlas
- Geometric match to IL_7RQB_075
- Geometric discrepancy: 0.1768
- The information below is about IL_7RQB_075
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_56467.8
- Basepair signature
- cWW-tSH-tSH-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
6R5Q|1|5|C|2589
6R5Q|1|5|G|2590
6R5Q|1|5|A|2591
6R5Q|1|5|U|2592
6R5Q|1|5|C|2593
*
6R5Q|1|5|G|2752
6R5Q|1|5|G|2753
6R5Q|1|5|G|2754
6R5Q|1|5|A|2755
6R5Q|1|5|G|2756
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- uL2
- Chain Z
- 60S ribosomal protein L27
- Chain g
- eL34
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