IL_6R5Q_183
3D structure
- PDB id
- 6R5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (post-state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 6R5Q|1|K|U|172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R5Q_183 not in the Motif Atlas
- Homologous match to IL_4V88_394
- Geometric discrepancy: 0.1818
- The information below is about IL_4V88_394
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
6R5Q|1|K|G|145
6R5Q|1|K|G|146
6R5Q|1|K|A|147
6R5Q|1|K|U|148
6R5Q|1|K|A|149
6R5Q|1|K|A|150
6R5Q|1|K|C|151
*
6R5Q|1|K|G|167
6R5Q|1|K|C|168
6R5Q|1|K|U|169
6R5Q|1|K|A|170
6R5Q|1|K|A|171
6R5Q|1|K|U|172
6R5Q|1|K|A|173
6R5Q|1|K|C|174
Current chains
- Chain K
- 18S ribosomal RNA
Nearby chains
- Chain NN
- eS24
- Chain W
- Ribosomal protein L24
- Chain z
- 40S ribosomal protein S6
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