IL_6R6G_074
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUAAG*CCAUA
- Length
- 10 nucleotides
- Bulged bases
- 6R6G|1|5|U|1607
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6G_074 not in the Motif Atlas
- Homologous match to IL_8C3A_051
- Geometric discrepancy: 0.1548
- The information below is about IL_8C3A_051
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
6R6G|1|5|U|1442
6R6G|1|5|U|1443
6R6G|1|5|A|1444
6R6G|1|5|A|1445
6R6G|1|5|G|1446
*
6R6G|1|5|C|1604
6R6G|1|5|C|1605
6R6G|1|5|A|1606
6R6G|1|5|U|1607
6R6G|1|5|A|1608
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain F
- uL30
- Chain Q
- eL18
- Chain e
- eL32
- Chain f
- eL33
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