IL_6R6G_146

3D structure

PDB id

6R6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of XBP1u-paused ribosome nascent chain complex with SRP.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

ACAUUU*ACCAU

Length

11 nucleotides

Bulged bases

6R6G|1|5|C|3240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6R6G|1|5|A|3194
6R6G|1|5|C|3195
6R6G|1|5|A|3196
6R6G|1|5|U|3197
6R6G|1|5|U|3198
6R6G|1|5|U|3199
*
6R6G|1|5|A|3239
6R6G|1|5|C|3240
6R6G|1|5|C|3241
6R6G|1|5|A|3242
6R6G|1|5|U|3243

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

uL3

Chain V

eL14

Chain W

Ribosomal protein L24