IL_8GLP_317

3D structure

PDB id

8GLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

ACAU(PSU)U*ACCA(PSU)

Length

11 nucleotides

Bulged bases

8GLP|1|L5|C|4670, 8GLP|1|L5|C|4671

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GLP|1|L5|A|4624
8GLP|1|L5|C|4625
8GLP|1|L5|A|4626
8GLP|1|L5|U|4627
8GLP|1|L5|PSU|4628
8GLP|1|L5|U|4629
*
8GLP|1|L5|A|4669
8GLP|1|L5|C|4670
8GLP|1|L5|C|4671
8GLP|1|L5|A|4672
8GLP|1|L5|PSU|4673

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

60S ribosomal protein L23

Chain LW

60S ribosomal protein L24