IL_6R6G_204
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAU*AAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6G_204 not in the Motif Atlas
- Homologous match to IL_4V88_406
- Geometric discrepancy: 0.257
- The information below is about IL_4V88_406
- Detailed Annotation
- Isolated near basepair
- Broad Annotation
- Isolated near basepair
- Motif group
- IL_76004.2
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 18
Unit IDs
6R6G|1|K|C|459
6R6G|1|K|A|460
6R6G|1|K|U|461
*
6R6G|1|K|A|468
6R6G|1|K|A|469
6R6G|1|K|G|470
Current chains
- Chain K
- 18S ribosomal RNA
Nearby chains
- Chain AD
- Signal recognition particle 9 kDa protein
- Chain AE
- Signal recognition particle 14 kDa protein
- Chain NN
- 40S ribosomal protein S24
- Chain V
- eL14
- Chain z
- 40S ribosomal protein S6
Coloring options: