IL_6R6G_281
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGGA*UGCG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6G_281 not in the Motif Atlas
- Geometric match to IL_7WIE_001
- Geometric discrepancy: 0.2741
- The information below is about IL_7WIE_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25872.4
- Basepair signature
- cWW-cWW-cWH-cWW
- Number of instances in this motif group
- 5
Unit IDs
6R6G|1|5|C|770
6R6G|1|5|G|771
6R6G|1|5|G|772
6R6G|1|5|A|773
*
6R6G|1|5|U|782
6R6G|1|5|G|783
6R6G|1|5|C|784
6R6G|1|5|G|785
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain D
- 60S ribosomal protein L5
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